Outbreak Simulation · Wave 4 · Foundation v1.0

What does AIMS actually change when an outbreak hits?

A scroll-driven simulation of one Lassa fever index case at UBTH in Benin City, comparing standard care to AIMS-equipped care across a 60-day horizon. Numbers below are central estimates from the locked methodology brief.

Disease: Lassa fever State: Edo (1,250 cases / 178 deaths in 2024) Anchor hospital: UBTH (~850 beds, designated Lassa center) Horizon: 60 days
Chapter 1
University of Benin Teaching Hospital 850 beds Edo State 1,250 Lassa cases / 178 deaths in 2024 NCDC

Without AIMS

A patient walks into UBTH with a fever. Doctors treat for malaria first, like they almost always do. Lassa is suspected only after antimalarials fail. By the time the patient is isolated, ~82 hours have passed and IPC compliance hovers around 65%.

Time elapsed in hospital
00:00 / 82:00
Patient arrives at UBTH

Symptom onset → hospital presentation took ~7 days before this clock began (community-side delay; AIMS does not address this).

Presentation → suspicion of Lassa h Ajayi 2013
Suspicion → PCR sample h Asogun 2012
PCR sample → result h NCDC labs
Result → isolation h WHO IPC 2018

Total in-hospital time before isolation: hours · ≈ 3.4 days · IPC compliance during care: WHO IPCAF 2018, NG tertiary.

Compounding secondary cases

At Reff = 2.85, one index case drives a generation cycle every 13 days. Across a 60-day horizon, the spread compounds:

Effective R per index case Community R + nosocomial R · standard care
Chapter 2
University of Benin Teaching Hospital 850 beds Edo State AIMS-equipped care

With AIMS

Continuous vital-sign and IPC sensors flag the syndromic pattern within the first 6-hour observation cycle. Isolation happens in ~33 hours instead of 82, and once isolated, sensor-monitored IPC keeps compliance above 90%.

Time elapsed in hospital
00:00 / 33:00
Patient arrives at UBTH

Same patient, same hospital, same 7-day community delay before arrival. From here, AIMS sensors compress the in-hospital pathway.

Presentation → suspicion of Lassa h Lumenix pilot
Suspicion → PCR sample h JHU pilot
PCR sample → result h NCDC labs (unchanged)
Result → isolation h Lumenix bed/flow

Total in-hospital time before isolation: hours · ≈ 1.4 days · IPC compliance during care: Lumenix pilot deployments.

Compounding secondary cases — AIMS scenario

At Reff = 1.26, the same generation cycle of 13 days produces dramatically fewer cases over the 60-day horizon:

Effective R per index case Community R + nosocomial R · sensor-equipped care
Chapter 3
Sensitivity analysis 4 parameters 1,000-run Monte Carlo 60-day horizon

How sure are we?

No simulation has a single answer. We vary the four most-uncertain inputs to show how the headline number moves — and run the full stochastic process a thousand times to show variance the deterministic math hides.

Tornado — sensitivity of Reff prevented per index case
Lower-bound outcome (less prevented) Central estimate Upper-bound outcome (more prevented)
Monte Carlo — 60-day cumulative cases per index case

A thousand stochastic runs of the branching process at each scenario's Reff. We report the 5th, 50th (median), and 95th percentile cumulative cases. Variance is real — a single bad index case in a poorly-IPC'd ward can generate 16+ secondaries (Fisher-Hoch 1995). The tail is in the data; we don't hide it.

Baseline (without AIMS)
Median · p5 · p95
With AIMS
Median · p5 · p95
Secondary cases prevented per index case Baseline Reff − AIMS Reff · central estimate
Chapter 4
University of Benin Teaching Hospital Edo / Lassa / 60-day horizon One index case

What this means

One headline number, the deaths it implies at Edo's 14.2% case fatality rate, and an honest list of what this simulation does not claim.

Headline · per index case at UBTH
1.59

AIMS prevents 1.59 secondary infections per Lassa index case at UBTH (central estimate, 60-day horizon). Compounded across the branching process, that translates to ~92 cases averted per index case introduced into the hospital — and approximately ~13 deaths averted at Edo's 14.2% case fatality rate (NCDC 2024).

Reff baseline
2.85
Standard care · 82h to isolation · 65% IPC
Reff with AIMS
1.26
Sensor-equipped care · 33h to isolation · 92% IPC
Time saved per case
−49 h
From symptom-onset clock to isolation
What this simulation does not claim

Methodology brief, Section 7. These caveats are visible — not buried in an appendix — because the consortium audience reads them first.

  1. Not a clinical model. This simulates aggregate transmission, not individual patient outcomes. Real clinical decision-making is more nuanced.
  2. AIMS deltas are best-evidence pilot estimates, not RCT outcomes. Lumenix pilot deployments show the IPC-compliance lift and workflow time savings; we have not yet run a pre/post Lassa outcome study at a deployed site.
  3. Single hospital, single disease, single state. The methodology generalises; the numbers do not. A Marburg outbreak in Kano would need its own brief.
  4. Time-to-PCR is unchanged in the AIMS scenario. The 24-hour lab turnaround is a system constraint AIMS does not address. We name this explicitly so stakeholders don't expect AIMS to fix it.
  5. Patient-side delay (symptom → presentation) is unchanged. AIMS is a hospital intervention; community awareness campaigns are a separate lever.
  6. Branching-process variance is real. A single bad index case in a poorly-IPC'd ward can generate 16+ secondaries (Fisher-Hoch 1995). The 1,000-run Monte Carlo in Chapter 3 shows this tail; we don't hide it.
Headline · prevented secondary cases per index case Edo / Lassa / UBTH · central estimate